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public:matlab_tips [2016/04/04 15:44] fangfufu [Sparse vs Dense] |
public:matlab_tips [2016/04/04 15:50] fangfufu old revision restored (2016/04/02 07:41) |
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+ | ====== Matlab Tips ====== | ||

+ | ===== General tips ===== | ||

+ | - If you plan to use parallel for-loop, put the parfor statement in the outermost loop to reduce inter-process communication. | ||

+ | ===== Simple text progress bar ===== | ||

+ | <code matlab> | ||

+ | disp(' '); | ||

+ | for i = 1:x | ||

+ | fprintf('\b\b\b\b\b\b%05.2f%%', i/x*100); | ||

+ | %%%%% Do your biddings here %%%%% | ||

+ | end | ||

+ | disp(' '); | ||

+ | </code> | ||

+ | ===== Highly unscientific benchmark of prod() ===== | ||

+ | ==== Sparse vs Dense ==== | ||

+ | <code matlab> | ||

+ | >> a = rand(1000); | ||

+ | >> b = eye(1000); | ||

+ | >> c = sparse(a); | ||

+ | >> d = sparse(b); | ||

+ | >> tic; for i = 1:10000; prod(a); end; toc | ||

+ | Elapsed time is 7.212577 seconds. | ||

+ | >> tic; for i = 1:10000; prod(b); end; toc | ||

+ | Elapsed time is 3.566560 seconds. | ||

+ | >> tic; for i = 1:10000; prod(c); end; toc | ||

+ | Elapsed time is 27.455137 seconds. | ||

+ | >> tic; for i = 1:10000; prod(d); end; toc | ||

+ | Elapsed time is 0.030041 seconds. | ||

+ | >> tic; for i = 1:10000; prod(a); end; toc | ||

+ | Elapsed time is 7.250969 seconds. | ||

+ | >> tic; for i = 1:10000; prod(b); end; toc | ||

+ | Elapsed time is 3.645549 seconds. | ||

+ | >> tic; for i = 1:10000; prod(c); end; toc | ||

+ | Elapsed time is 27.538796 seconds. | ||

+ | >> tic; for i = 1:10000; prod(d); end; toc | ||

+ | Elapsed time is 0.029214 seconds. | ||

+ | >> | ||

+ | |||

+ | >> n = 100000; | ||

+ | >> a = rand(n,1); | ||

+ | >> b = 1; | ||

+ | >> tic; for i = 1:n; prod(a); end; toc; | ||

+ | Elapsed time is 4.849304 seconds. | ||

+ | >> tic; for i = 1:n; b = b * prod(a(i)); end; toc | ||

+ | Elapsed time is 0.004573 seconds. | ||

+ | >> | ||

+ | </code> | ||

+ | |||

+ | ==== Prod vs repeated multiplication ==== | ||

+ | === Script === | ||

+ | <code matlab> | ||

+ | clear; | ||

+ | n = 10000; | ||

+ | a = rand(n,1) * exp(1); | ||

+ | b = 1; | ||

+ | |||

+ | tic; | ||

+ | for i = 1:n; | ||

+ | c = prod(a); | ||

+ | end; | ||

+ | toc; | ||

+ | |||

+ | tic; | ||

+ | for j = 1:n | ||

+ | for i = 1:n; | ||

+ | b = b * a(i); | ||

+ | end; | ||

+ | end | ||

+ | toc; | ||

+ | </code> | ||

+ | === Results === | ||

+ | <code matlab> | ||

+ | >> test | ||

+ | Elapsed time is 0.168450 seconds. | ||

+ | Elapsed time is 1.003991 seconds. | ||

+ | </code> | ||

+ | Note that with repeated multiplication your numerical accuracy will suffer too! |